Stability of Clinical Prediction Models Developed Using Statistical or Machine Learning Approaches

14 Oct 2022 · 44 min
44:23

Professor Richard Riley (University of Birmingham) and Gary Collins (University of Oxford) present a methodological lecture on the instability of clinical prediction models developed with statistical or machine learning methods. The talk defines clinical prediction models, explains why many are unreliable when built on small or poorly representative datasets, and introduces the concept of instability – the variation in model coefficients, selected predictors, and individual risk predictions that would arise if the model were re‑derived from a different random sample of the same size. Through a series of simulation studies, Riley demonstrates how instability manifests at the level of mean risk, risk distribution, subgroup averages, and single‑patient predictions, and how it diminishes with larger sample sizes. He then proposes a bootstrap‑based workflow (following Altman & Anderson) to quantify instability in real data, describing key visual tools (prediction‑instability plots, calibration‑instability plots) and metrics (mean absolute prediction error – MAPE, classification‑instability index). Real‑world examples using the GUSTO‑1 myocardial infarction dataset illustrate how instability varies with sample size, number of noise predictors, and modelling approach (unpenalised logistic regression, LASSO, random forest, recalibrated forest). The lecture links instability to calibration, decision‑threshold classification, and algorithmic fairness across sub‑groups, showing that even modern machine‑learning methods do not eliminate the problem when data are limited. Riley concludes with practical recommendations: always assess and report instability at development, target adequate sample sizes, use penalisation and internal validation, and provide instability visualisations alongside traditional performance metrics. References and resources (prognosisresearch.com, training courses) are provided.

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